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cctien
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protein_backbone_cath_4.2

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train · 18k rows

seq stringlengths 40 500	coords dict	num_chains int64 1 498	name stringlengths 6 6	CATH sequencelengths 1 5	coords_C sequencelengths 40 500	coords_CA sequencelengths 40 500	coords_N sequencelengths 40 500	coords_O sequencelengths 40 500	lengths_seq int64 40 500
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RTDCYGNVNRIDTTGASCKTAKPEGLSYCGVSASKKIAERDLQAMDRYKTIIKKVGEKLCVEPAVIAGIISRESHAGKVLKNGWGDRGNGFGLMQVDKRSHKPQGTWNGEVHITQGTTILINFIKTIQKKFPSWTKDQQLKGGISAYNAGAGNVRSYARMDIGTTHDDYANDVVARAQYYKQHGY	{ "N": [ [ 6.35, 34.124, 50.75 ], [ 5.206, 32.767, 48.261 ], [ 4.497, 34.9, 46.908 ], [ 6.285, 37.076, 46.089 ], [ 6.691, 38.264, 43.538 ], [ 4.32, 39.02, 42.427 ...	2	153l.A	[ "1.10.530" ]	[ [ 6.334, 32.484, 48.874 ], [ 4.781, 33.87, 46.108 ], [ 4.987, 37.273, 45.992 ], [ 7.073, 38.939, 44.605 ], [ 5.366, 39.179, 41.653 ], [ 2.071, 38.002, 41.992 ], [ -0.922, 37.069, 40.232 ], [ -2.639, ...	[ [ 6.324, 32.707, 50.379 ], [ 5.197, 32.618, 46.826 ], [ 4.02, 36.132, 46.259 ], [ 7.131, 38.21, 45.919 ], [ 6.719, 38.935, 42.27 ], [ 2.986, 39.221, 41.892 ], [ -0.269, 37.184, 41.565 ], [ -1.14, ...	[ [ 6.35, 34.124, 50.75 ], [ 5.206, 32.767, 48.261 ], [ 4.497, 34.9, 46.908 ], [ 6.285, 37.076, 46.089 ], [ 6.691, 38.264, 43.538 ], [ 4.32, 39.02, 42.427 ], [ 0.819, 38.158, 41.541 ], [ -0.712, 35....	[ [ 7.356, 32.06, 48.316 ], [ 4.716, 33.93, 44.845 ], [ 4.53, 38.398, 45.795 ], [ 7.459, 40.095, 44.53 ], [ 5.254, 39.476, 40.486 ], [ 2.522, 36.96, 42.438 ], [ -1.584, 37.99, 39.76 ], [ -3.136, 36....	185
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"AALEPTDSGAPSAIVMFPVGEKPNPKGAAMKPVVFNHLIHEKKIADCETCHHTGDPVSCSTCHTVEGKAEGDYITLDRAMHATDIAARAKGNTPTSCVS(...TRUNCATED)	{"N":[[9.987,-8.606,16.301],[9.492,-10.473,14.257],[7.651,-10.74,11.215],[4.141,-9.864,11.096],[1.85(...TRUNCATED)	27	19hc.A	[ "3.90.10" ]	[[10.038,-9.304,13.922],[7.809,-10.509,12.518],[5.212,-10.65,11.177],[2.392,-11.564,10.755],[0.071,-(...TRUNCATED)	[[10.68,-8.469,15.029],[8.883,-11.328,13.234],[6.505,-10.136,10.546],[2.82,-10.336,11.551],[1.357,-1(...TRUNCATED)	[[9.987,-8.606,16.301],[9.492,-10.473,14.257],[7.651,-10.74,11.215],[4.141,-9.864,11.096],[1.854,-12(...TRUNCATED)	[[10.078,-8.88,12.763],[7.093,-9.763,13.198],[5.184,-11.758,11.722],[2.466,-11.526,9.516],[-0.815,-1(...TRUNCATED)	292
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MKRRIRRERNKMAAAKSRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKL	{"N":[[null,null,null],[null,null,null],[58.293,29.583,30.684],[56.881,26.331,30.879],[57.46,24.999,(...TRUNCATED)	10	1a02.F	[ "1.20.5" ]	[[null,null,null],[null,null,null],[57.422,27.413,31.425],[56.176,25.22,32.994],[57.957,25.807,35.57(...TRUNCATED)	[[null,null,null],[null,null,null],[58.515,28.109,30.628],[55.829,25.578,31.547],[57.871,24.626,34.6(...TRUNCATED)	[[null,null,null],[null,null,null],[58.293,29.583,30.684],[56.881,26.331,30.879],[57.46,24.999,33.27(...TRUNCATED)	[[null,null,null],[null,null,null],[57.107,27.829,32.539],[55.29,25.159,33.851],[57.4,25.77,36.653],(...TRUNCATED)	56
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"NKYFENVSKIKYEGPKSNNPYSFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGKATMQRPWNHYTDPMDIAKARVEAAFEFFDKINAPYFCF(...TRUNCATED)	{"N":[[82.205,59.57,21.704],[79.679,59.057,19.089],[76.874,60.25,19.441],[76.518,61.534,21.926],[78.(...TRUNCATED)	16	1a0c.A	[ "3.20.20" ]	[[80.575,59.68,19.844],[77.701,60.647,18.48],[75.697,61.904,20.958],[78.129,62.551,23.381],[80.653,6(...TRUNCATED)	[[81.476,58.77,20.726],[78.847,59.728,18.078],[75.661,61.005,19.731],[76.64,62.289,23.159],[80.2,63.(...TRUNCATED)	[[82.205,59.57,21.704],[79.679,59.057,19.089],[76.874,60.25,19.441],[76.518,61.534,21.926],[78.756,6(...TRUNCATED)	[[80.671,60.906,19.91],[77.535,61.698,17.868],[74.981,62.907,21.026],[78.69,62.143,24.401],[81.762,6(...TRUNCATED)	438

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Dataset Description

https://github.com/jingraham/neurips19-graph-protein-design/tree/master/data https://people.csail.mit.edu/ingraham/graph-protein-design/data/cath/

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